GPL1355[ACCN] AND gpl[ETYP] NOT 100001355[uid] - GEO DataSets

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 07, 2012: annotation table updated with netaffx build 32 Protocol: see manufacturer's web site The GeneChip Rat Genome 230 2.0 Array is a powerful tool for toxicology, neurobiology, and other applications using rat as a model organism. more...

Organism:: Rattus norvegicus

1 Series
1 Related Platform
6 Samples

Download data

Platform

Accession:: GPL16251

ID:: 100016251

Select item 1000149766.

Affymetrix GeneChip Rat Genome 230 2.0 Array [custom CDF: Rn230_Rn_UG_v9]

(Submitter supplied) A Custom CDF Version 9 with Unigene based gene definitions was used to annotate the arrays Protocol: see manufacturer's web site

Organism:: Rattus norvegicus

1 Series
1 Related Platform
6 Samples

Download data: CDF, PSI, TXT

Platform

Accession:: GPL14976

ID:: 100014976

Select item 1000141237.

Affymetrix GeneChip Rat Genome 230 2.0 Array (CDF: rat2302rnentrezgcdf_13.0.0)

(Submitter supplied) Custom CDF (Brainarray Entrez Gene v13.0.0) Protocol: See manufacturer's web site

Organism:: Rattus norvegicus

1 Series
1 Related Platform
24 Samples

Download data: CDF, TXT

Platform

Accession:: GPL14123

ID:: 100014123

Select item 1000102268.

Affymetrix GeneChip Rat Genome 230 2.0 Array (CDF:rat2302daiplusv6.cdf)

(Submitter supplied) This platform is identical to GPL1355 but a custom CDF (rat2302daiplusv6.cdf) was used to extract data. Probes were re-annotated according to de Leeuw et al., 2008 (PMID: 18710586), which resulted in 27,630 probe-sets including 49 controls instead of the 31,099 probe-sets containing 57 controls defined by Affymetrix. Protocol: See manufacturer's web site.

Organism:: Rattus norvegicus

1 Series
1 Related Platform
52 Samples

Download data: CDF

Platform

Accession:: GPL10226

ID:: 100010226

Select item 1000075989.

Affymetrix GeneChip Rat Genome 230 2.0 Array (CDF: rat2302rnentrezgcdf_11.0.1)

(Submitter supplied) Custom CDF (Brainarray Entrez Gene v11.0.1); UniGene build 165 Protocol: see manufacturer's web site

Organism:: Rattus norvegicus

1 Series
1 Related Platform
36 Samples

Download data: TAR

Platform

Accession:: GPL7598

ID:: 100007598

Select item 10000919910.

Affymetrix GeneChip Rat Genome 230 2.0 Array (CDF: Rat2302_Rn_ENTREZG.cdf version 12.0.0)

(Submitter supplied) Custom CDF (Brainarray Entrez Gene v12.0.0) Protocol: see manufacturer's web site

Organism:: Rattus norvegicus

4 Series
1 Related Platform
106 Samples

Download data: ZIP

Platform

Accession:: GPL9199

ID:: 100009199

Select item 10000859711.

Affymetrix GeneChip Rat Genome 230 2.0 Array [CDF: Brainarray Version 11, Rn230_Rn_ENTREZG]

(Submitter supplied) see manufacturer's web site

Organism:: Rattus norvegicus

2 Series
1 Related Platform
29 Samples

Download data: CDF, TXT

Platform

Accession:: GPL8597

ID:: 100008597

Select item 10000687212.

Affymetrix GeneChip Rat Genome 230 2.0 Array [CDF: Brainarray_Rn230_Rn_UG_v10.cdf]

(Submitter supplied) Custom CDF (Brainarray v10); UniGene build 165 Protocol: see manufacturer's web site

Organism:: Rattus norvegicus

1 Series
1 Related Platform
5 Samples

Download data: CDF

Platform

Accession:: GPL6872

ID:: 100006872

Select item 10000820113.

Affymetrix GeneChip Rat Genome 230 2.0 Array [CDF:Rn230_Rn_ENTREZG]

(Submitter supplied) This platform is identical to GPL1355 but a custom CDF environment was used to extract data. We used CDF: Rn230_Rn_ENTREZG (version 10). The CDF can be found at the Web link below. Protocol: see manufacturer's web site